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- Soaplab overview
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Provider:
European Bioinformatics Institute (EBI)
Location:
United Kingdom
Submitter / Source:
SoapLab Support (over 3 years ago)
Base URL:
http://www.ebi.ac.uk:80/soaplab/typed/services/edit.vectorstrip
WSDL Location:
http://www.ebi.ac.uk/soaplab/typed/services/edit.vectorstrip?wsdl(download last cached WSDL file)
Documentation URL(s): SoapLab Support (over 2 years ago)http://emboss.sourceforge.net/apps/release/6.0/emboss/apps/vectorstrip.html
Login to add a documentation URL Description(s): from provider’s description doc (over 2 years ago) Removes vectors from the ends of nucleotide sequence(s)
SoapLab Support (over 2 years ago)Removes vectors from the ends of nucleotide sequence(s)
Login to add a description Details (from Soaplab server): from Soaplab server(over 2 years ago)
- ds_lsr_analysis :
- analysis :
- name : vectorstrip
- output :
- version : 6.1.0
- type : Edit
- installation : Soaplab2 default installation
- description : Removes vectors from the ends of nucleotide sequence(s)
- input :
- analysis_extension :
- analysis :
- ds_lsr_analysis :
- analysis :
- name : vectorstrip
- output :
- version : 6.1.0
- type : Edit
- installation : Soaplab2 default installation
- description : Removes vectors from the ends of nucleotide sequence(s)
- input :
- name : readfile
- default : false
- mandatory : false
- type : boolean
- name : mismatch
- default : 10
- mandatory : false
- type : long
- name : besthits
- default : false
- mandatory : false
- type : boolean
- name : allsequences
- default : false
- mandatory : false
- type : boolean
- analysis_extension :
- parameter :
- data :
- list :
- list_item :
- level : 0
- value : gcg
- level : 0
- value : gcg8
- level : 0
- value : embl
- level : 0
- value : swiss
- level : 0
- value : fasta
- level : 0
- value : ncbi
- level : 0
- value : genbank
- level : 0
- value : nbrf
- level : 0
- value : pir
- level : 0
- value : codata
- level : 0
- value : strider
- level : 0
- value : clustal
- level : 0
- value : phylip
- level : 0
- value : acedb
- level : 0
- value : msf
- level : 0
- value : jackknifer
- level : 0
- value : jackknifernon
- level : 0
- value : nexus
- level : 0
- value : nexusnon
- level : 0
- value : treecon
- level : 0
- value : mega
- level : 0
- value : meganon
- level : 0
- value : ig
- level : 0
- value : staden
- level : 0
- value : text
- level : 0
- value : raw
- type : full
- list_item :
- list :
- base :
- base :
- ordering : 4
- name : readfile
- qualifier : readfile
- default : false
- mandatory : false
- type : boolean
- prompt : Are your vector sequences in a file?
- range :
- format : %d
- repeatable :
- base :
- ordering : 9
- name : mismatch
- qualifier : mismatch
- default : 10
- mandatory : false
- type : long
- prompt : Max allowed % mismatch
- base :
- ordering : 10
- name : besthits
- qualifier : besthits
- default : false
- mandatory : false
- type : boolean
- prompt : Show only the best hits (minimise mismatches)?
- data :
- result :
- iotype : output
- base :
- data :
- ioformat : unspecified
- iotype : input
- repeatable :
- base :
- standard :
- repeatable :
- base :
- standard :
- repeatable :
- base :
- base :
- ordering : 15
- name : allsequences
- qualifier : allsequences
- default : false
- mandatory : false
- type : boolean
- prompt : Show all sequences in output
- data :
- result :
- iotype : output
- base :
- standard :
- list :
- list_item :
- level : 0
- value : gcg
- level : 0
- value : gcg8
- level : 0
- value : embl
- level : 0
- value : swiss
- level : 0
- value : fasta
- level : 0
- value : ncbi
- level : 0
- value : genbank
- level : 0
- value : nbrf
- level : 0
- value : pir
- level : 0
- value : codata
- level : 0
- value : strider
- level : 0
- value : clustal
- level : 0
- value : phylip
- level : 0
- value : acedb
- level : 0
- value : msf
- level : 0
- value : jackknifer
- level : 0
- value : jackknifernon
- level : 0
- value : nexus
- level : 0
- value : nexusnon
- level : 0
- value : treecon
- level : 0
- value : mega
- level : 0
- value : meganon
- level : 0
- value : ig
- level : 0
- value : staden
- level : 0
- value : text
- level : 0
- value : raw
- type : full
- list_item :
- repeatable :
- list :
- base :
- data :
- option :
- name : emboss
- value : true
- type : normal
- name : installation
- value : Soaplab2 default installation
- type : normal
- name : version
- value : 6.1.0
- type : normal
- app_info :
- category : edit
- help_url : http://emboss.sourceforge.net/apps/release/6.1/emboss/apps/vectorstrip.html
- event :
- action :
- id : _E_1
- parameter :
- analysis :
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