Provider:
Bielefeld University
Location:
Bielefeld, GERMANY
Submitter / Source:
Franck Tanoh (28 days ago)
Base URL:
http://bibiwsserv.techfak.uni-bielefeld.de/knotinframe/axis/knotinframePort
WSDL Location:
http://bibiserv.techfak.uni-bielefeld.de/wsdl/knotinframe.wsdl(download last cached WSDL file)
Documentation URL(s): Franck Tanoh (28 days ago)http://bibiserv.techfak.uni-bielefeld.de/knotinframe/webservice.html
Login to add a documentation URL Description(s): Franck Tanoh (28 days ago)KnotInFrame is a pipeline to predict ribosomal -1 frameshift sites with a simple pseudoknot as secondary structure in DNA and RNA sequences. The prediction is based on a comparison between the minimal free energy (mfe) structure calculated by RNAfold ( http://www.tbi.univie.ac.at/~ivo/RNA/ ) from the Vienna package and the mfe-structure computed by a modified version of pknotsRG-mfe, called pknotsRG-frameshift developed by J. Reeder/R.Giegerich.
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