MegaBlast at SIB SOAP

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About Soaplab

Soaplab services are command line applications, wrapped as SOAP services, and served from a Soaplab server. All Soaplab services have the same generic set of SOAP operations (depending on the Soaplab version) as they all share a standardised interface.

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Provider:
European Molecular Biology Network (EMBnet)

Location:
European Union

Submitter / Source:
The EMBRACE Registry (about 1 year ago)

Base URL:
http://wsembnet.vital-it.ch/soaplab2-axis/services/embnet.megablast

WSDL Location:
http://wsembnet.vital-it.ch/soaplab2/services/embnet.megablast?wsdl(download last cached WSDL file)

Documentation URL(s): The EMBRACE Registry (about 1 year ago)http://ch.embnet.org/software/aBLAST.html

Login to add a documentation URL Description(s): The EMBRACE Registry (about 1 year ago)megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database.
Computations are done on the Vital-IT cluster (SIB).
Most NCBI BLAST (2.2.17) options are available.
Most SIB databases are available: STS, EST, HTG, refseq, repbase, …

INPUT: nucleotide sequence(s) + choose a database
OUTPUT: BLAST output

Login to add a description Details (from Soaplab server): Not available License(s): None Login to add license info Cost: No info yet Login to add cost info Usage Conditions: No info yet Login to add usage conditions info Contact Info: None Login to add contact info Publications: for this service. This can be a URI to the publication and/or a DOI. None Login to add publication info Citations: None Login to add a citation