Provider:
EMBL Nucleotide Sequence Database (Hiedelberg)
Location:
Heidelberg, Germany
Submitter / Source:
kate (about 1 year ago)
Base URL:
http://luna.embl.de:8080/axis2/services/ConservationScorer
WSDL Location:
http://conscore.embl.de/webservice/CS.wsdl(download last cached WSDL file)
Documentation URL(s): None Login to add a documentation URL Description(s): from provider’s description doc (about 1 month ago) —
service_documentation:
sample_client:
__content__: http://conscore.embl.de/webservice/clients/conScorer.txt
reference:
__content__: A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences. Claudia Chica, Alberto Labarga, Cathryn M Gould, Rodrigo Lopez and Toby J Gibson. BMC Bioinformatics. 2008 May 6; 9(1):229.
additional_info:
block:
– comment:
__content__: “The CS Web Service should also be accessible via a graphical interface using the Cinema software. Cinema is a tool for annotated multiple alignment visualisation that is beingn developed in the context of the UTOPIA Toolset n ”
web_link:
__content__: http://utopia.cs.manchester.ac.uk/
– comment:
__content__: “Instructions for using UTOPIA-Cinema as a front end for the CS Web Service aren available at: n ”
web_link:
__content__: http://utopia.cs.man.ac.uk/ELM-CS
web_site: {}
schema_location: http://www.bccs.uib.no/ServiceDocumentation http://conscore.embl.de/webservice/schema/ServiceDocumentation.xsd
content: “n ”
kate (about 1 year ago)This service calculates the conservation of ELM matches in a set of homologous sequences.
the web service consists of three methods:
-
- RunJob
-
- GetStatus
-
- GetResult
Reference:
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences.
Claudia Chica, Alberto Labarga, Cathryn M Gould, Rodrigo Lopez and Toby J Gibson.
BMC Bioinformatics. 2008 May 6;9(1):229
Login to add a description License(s): None Login to add license info Cost: No info yet Login to add cost info Usage Conditions: No info yet Login to add usage conditions info Contact Info: None Login to add contact info Publications: for this service. This can be a URI to the publication and/or a DOI. Franck Tanoh (about 1 year ago)doi:10.1186/1471-2105-9-229
Login to add publication info Citations: None Login to add a citation