Provider:
European Bioinformatics Institute (EBI)
Location:
United Kingdom
Submitter / Source:
EMBL-EBI Support (over 2 years ago)
Base URL:
http://www.ebi.ac.uk/Tools/es/ws-servers/WSTCoffee
WSDL Location:
http://www.ebi.ac.uk/Tools/webservices/wsdl/WSTCoffee.wsdl(download last cached WSDL file)
Documentation URL(s): Rodrigo Lopez (over 2 years ago)http://www.ebi.ac.uk/Tools/t-coffee/
Hamish McWilliam (about 1 year ago)http://www.ebi.ac.uk/Tools/webservices/services/tcoffee
Login to add a documentation URL Description(s): from provider’s description doc (5 months ago) WSTCoffee: protein and nucleotide multiple sequence alignment using T-COFFEE (see http://www.ebi.ac.uk/Tools/webservices/services/tcoffee).
Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March 2011, see http://www.ebi.ac.uk/Tools/webservices/services/tcoffee for details of alternative REST and document/literal SOAP services.
Rodrigo Lopez (over 2 years ago)T-Coffee is a multiple sequence alignment program. Multiple sequence alignment programs are meant to align a set of sequences previously gathered using other programs such as BLAST or FASTA. The main characteristic of T-Coffee is that it will allow you to combine results obtained with several alignment methods. For instance if you have an alignment coming from ClustalW, an other alignment coming from Dialign, and a structural alignment of some of your sequences, T-Coffee will combine all that information and produce a new multiple sequence having the best agreement with all these methods. By default, T-Coffee will compare all your sequences two by two, producing a global alignment and a series of local alignments (using lalign). The program will then combine all these alignments into a multiple alignment.
T-Coffee Home: http://www.tcoffee.org/
Hamish McWilliam (12 months ago)This RPC/encoded SOAP service is deprecated, and due to be retired in 2011.
Please use the equivalent REST or document/literal SOAP services instead.
Login to add a description License(s): None Login to add license info Cost: No info yet Login to add cost info Usage Conditions: Hamish McWilliam (about 1 year ago)E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices.</p<>>
EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Information/termsofuse.html
Login to add usage conditions info Contact Info: Hamish McWilliam (about 1 year ago)http://www.ebi.ac.uk/support/index.php?query=WebServices
Login to add contact info Publications: for this service. This can be a URI to the publication and/or a DOI. EMBL-EBI Support (5 months ago)McWilliam H., Valentin F., Goujon M., Li W., Narayanasamy M., Martin J., Miyar T. and Lopez R. (2009)
“Web services at the European Bioinformatics Institute – 2009”
Nucleic Acids Res. 37:W6-W10
PMID: 19435877 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId=19435877&dataSource;=MED)
DOI: 10.1093/nar/gkp302 (http://dx.doi.org/10.1093/nar/gkp302)
Login to add publication info Citations: None Login to add a citation